Table 1 Percent change in most abundant phyla and genus across exposure and diet groups
|  | LF + DEP compared to LF + CON | HF + DEP compared to HF + CON | ||
|---|---|---|---|---|
Percent change (%) | Difference | Percent change (%) | Difference | |
P_Firmicutes |  + 20.96 |  + 14.54 |  − 10.70 |  − 7.47 |
G_Lactobacillus |  − 27.80 |  − 3.87 |  − 13.60 |  − 6.56 |
G_Turicibacter |  + 31.35 |  + 11.54 |  − 90.69 |  − 2.38 |
G_Lactococcus |  + 18.22 |  + 0.82 |  + 31.24 |  + 3.88 |
G_Blautia |  + 76.98 |  + 3.05 |  − 58.60 |  − 0.82 |
G_Natronincola |  + 60.76 |  + 1.21 |  − 96.03 |  − 2.76 |
G_Clostridium |  + 51.45 |  + 0.94 |  + 18.63 |  + 0.20 |
G_Ruminococcus |  + 55.37 |  + 2.06 |  + 48.16 |  + 0.18 |
G_Sarcina |  − 65.14 |  − 1.34 |  − 78.41 |  − 0.29 |
G_Pediococcus |  − 14.23 |  − 0.07 |  − 9.90 |  − 0.13 |
G_Staphylococcus |  − 75.17 |  − 1.79 |  + 49.04 |  + 0.52 |
G_Alkalphilius |  + 61.25 |  + 1.22 |  − 86.51 |  − 0.42 |
G_Enterococcus |  + 75.97 |  + 0.32 |  − 36.91 |  − 0.60 |
P_Proteobacteria |  − 0.45 |  − 0.08 |  + 41.9 |  + 14.60 |
G_Escherichia |  − 23.43 |  − 2.91 |  + 59.41 |  + 13.46 |
G_Pseudomonas |  + 52.21 |  + 0.97 |  + 0.34 |  + 0.02 |
G_Serratia |  − 10.07 |  − 0.39 |  + 52.98 |  + 3.64 |
G_Delftia |  + 55.41 |  + 0.31 |  + 78.39 |  + 2.27 |
P_Actinobacteria |  − 78.32 |  − 18.38 |  − 85.81 |  − 8.18 |
G_Bifidobacterium |  − 63.59 |  − 16.56 |  − 97.08 |  − 10.24 |
P_Verrucomicrobia |  + 50.71 |  + 3.39 |  + 16.06 |  + 0.04 |
G_Akkermansia |  + 54.76 |  + 4.30 |  + 23.06 |  + 0.08 |
P_Bacteriodetes |  + 73.36 |  + 0.44 |  + 86.91 |  + 0.86 |
G_Parabacteroides |  + 81.81 |  + 0.16 |  − 66.75 |  − 0.01 |
G_Bacteroides |  + 39.62 |  + 0.04 |  − 100.00 |  − 0.04 |
P_Deferribacteres |  + 77.94 |  + 0.03 |  + 67.23 |  + 0.03 |
P_Thermi |  + 40.38 |  + 0.03 |  + 72.50 |  + 0.13 |
P_Tenericutes |  + 32.11 |  + 0.03 |  − 55.75 |  − 0.02 |